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refactor(QueryContext): move df methods utils to utils package (#17496)
* chore(common.utils): modified utils from module based to package based * refactor(common.utils): move QueryCacheManager to ad-hoc module * refactor(QueryContext): move df method utils to utils module
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@@ -33,7 +33,8 @@ from superset.common.chart_data import ChartDataResultFormat, ChartDataResultTyp
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from superset.common.db_query_status import QueryStatus
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from superset.common.query_actions import get_query_results
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from superset.common.query_object import QueryObject
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from superset.common.utils import QueryCacheManager
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from superset.common.utils import dataframe_utils as df_utils
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from superset.common.utils.query_cache_manager import QueryCacheManager
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from superset.constants import CacheRegion
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from superset.exceptions import QueryObjectValidationError, SupersetException
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from superset.extensions import cache_manager, security_manager
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@@ -106,14 +107,6 @@ class QueryContext:
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self.custom_cache_timeout = custom_cache_timeout
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self.cache_values = cache_values
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@staticmethod
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def left_join_df(
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left_df: pd.DataFrame, right_df: pd.DataFrame, join_keys: List[str],
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) -> pd.DataFrame:
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df = left_df.set_index(join_keys).join(right_df.set_index(join_keys))
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df.reset_index(inplace=True)
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return df
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def processing_time_offsets( # pylint: disable=too-many-locals
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self, df: pd.DataFrame, query_object: QueryObject,
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) -> CachedTimeOffset:
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@@ -194,7 +187,7 @@ class QueryContext:
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] - DateOffset(**normalize_time_delta(offset))
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# df left join `offset_metrics_df`
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offset_df = self.left_join_df(
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offset_df = df_utils.left_join_df(
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left_df=df, right_df=offset_metrics_df, join_keys=join_keys,
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)
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offset_slice = offset_df[metrics_mapping.values()]
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@@ -231,7 +224,7 @@ class QueryContext:
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)
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if self.enforce_numerical_metrics:
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self.df_metrics_to_num(df, query_object)
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df_utils.df_metrics_to_num(df, query_object)
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df.replace([np.inf, -np.inf], np.nan, inplace=True)
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@@ -271,15 +264,6 @@ class QueryContext:
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result.query = query
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return result
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@staticmethod
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def df_metrics_to_num(df: pd.DataFrame, query_object: QueryObject) -> None:
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"""Converting metrics to numeric when pandas.read_sql cannot"""
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for col, dtype in df.dtypes.items():
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if dtype.type == np.object_ and col in query_object.metric_names:
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# soft-convert a metric column to numeric
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# will stay as strings if conversion fails
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df[col] = df[col].infer_objects()
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def get_data(self, df: pd.DataFrame,) -> Union[str, List[Dict[str, Any]]]:
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if self.result_format == ChartDataResultFormat.CSV:
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include_index = not isinstance(df.index, pd.RangeIndex)
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16
superset/common/utils/__init__.py
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16
superset/common/utils/__init__.py
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@@ -0,0 +1,16 @@
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# Licensed to the Apache Software Foundation (ASF) under one
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# or more contributor license agreements. See the NOTICE file
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# distributed with this work for additional information
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# regarding copyright ownership. The ASF licenses this file
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# to you under the Apache License, Version 2.0 (the
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# "License"); you may not use this file except in compliance
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# with the License. You may obtain a copy of the License at
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#
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# http://www.apache.org/licenses/LICENSE-2.0
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#
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# Unless required by applicable law or agreed to in writing,
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# software distributed under the License is distributed on an
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# "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
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# KIND, either express or implied. See the License for the
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# specific language governing permissions and limitations
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# under the License.
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42
superset/common/utils/dataframe_utils.py
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42
superset/common/utils/dataframe_utils.py
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@@ -0,0 +1,42 @@
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# Licensed to the Apache Software Foundation (ASF) under one
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# or more contributor license agreements. See the NOTICE file
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# distributed with this work for additional information
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# regarding copyright ownership. The ASF licenses this file
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# to you under the Apache License, Version 2.0 (the
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# "License"); you may not use this file except in compliance
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# with the License. You may obtain a copy of the License at
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#
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# http://www.apache.org/licenses/LICENSE-2.0
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#
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# Unless required by applicable law or agreed to in writing,
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# software distributed under the License is distributed on an
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# "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
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# KIND, either express or implied. See the License for the
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# specific language governing permissions and limitations
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# under the License.
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from __future__ import annotations
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from typing import List, TYPE_CHECKING
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import numpy as np
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import pandas as pd
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if TYPE_CHECKING:
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from superset.common.query_object import QueryObject
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def left_join_df(
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left_df: pd.DataFrame, right_df: pd.DataFrame, join_keys: List[str],
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) -> pd.DataFrame:
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df = left_df.set_index(join_keys).join(right_df.set_index(join_keys))
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df.reset_index(inplace=True)
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return df
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def df_metrics_to_num(df: pd.DataFrame, query_object: QueryObject) -> None:
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"""Converting metrics to numeric when pandas.read_sql cannot"""
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for col, dtype in df.dtypes.items():
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if dtype.type == np.object_ and col in query_object.metric_names:
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# soft-convert a metric column to numeric
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# will stay as strings if conversion fails
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df[col] = df[col].infer_objects()
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@@ -14,6 +14,8 @@
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# KIND, either express or implied. See the License for the
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# specific language governing permissions and limitations
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# under the License.
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from __future__ import annotations
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import logging
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from typing import Any, Dict, List, Optional
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